| sbioevent | Warns | addevent | Events must belong to a model. Replace all existing instances
of sbioevent with addevent. |
| sbioparameter | Warns | addparameter | Parameters must belong to a model or a kinetic law. Replace
all existing instances of sbioparameter with addparameter. |
| sbioreaction | Warns | addreaction | Reactions must belong to a model. Replace all existing instances
of sbioreaction with addreaction. |
| Model name as an input argument
for sbioroot | Errors | sbioselect | sbioroot does not accept a model name as
an input argument. Use sbioselect to
query models by name. |
| sbiorule | Warns | addrule | Rules must belong to a model. Replace all existing instances
of sbiorule with addrule. |
| sbiospecies | Warns | addspecies | Species must belong to a compartment. Replace all existing
instances of sbiospecies with addspecies. |
| sbioregisterunit | Errors | Unit object and sbioaddtolibrary | See New Way to Add Units and Unit Prefixes. |
| sbiounregisterunit | Errors | sbioremovefromlibrary | See New Way to Add Units and Unit Prefixes. |
| sbioregisterunitprefix | Errors | Unit object and sbioaddtolibrary | See New Way to Add Units and Unit Prefixes. |
| sbiounregisterunitprefix | Errors | sbioremovefromlibrary | See New Way to Add Units and Unit Prefixes. |
| BuiltInKineticLaws | Errors | BuiltInLibrary | See Changes to the Library Structure in the Root. |
| BuiltInUnitPrefixes | Errors | BuiltInLibrary | See Changes to the Library Structure in the Root. |
| BuiltInUnits | Errors | BuiltInLibrary | See Changes to the Library Structure in the Root. |
| UserDefinedKineticLaws | Errors | UserDefinedLibrary | See Changes to the Library Structure in the Root. |
| UserDefinedUnits | Errors | UserDefinedLibrary | See Changes to the Library Structure in the Root. |
| UserDefinedUnitPrefixes | Errors | UserDefinedLibrary | See Changes to the Library Structure in the Root. |